Archive for changepoint detection

BayesComp 2025.3

Posted in pictures, Running, Statistics, Travel, University life with tags , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , on June 20, 2025 by xi'an

The second day of the conference started with a cooler and less humid weather (although this did not last!), although my brain felt a wee bit foggy from a lack of sleep (and I almost crashed while running on the hotel treadmill, at 14.5km/h!), and the plenary talk of my friend of many years Sylvia Früwirth-Schnatter on horseshoe priors and time-varying time series (à la West). With a nice closed-form representation involving hypergeometric functions of the second kind (my favourite!), with the addition of a triple-Gamma prior. Sylvia stressed on the enormous impact of the prior choice on change-point detection, which was already the point in the original horseshoe paper (as opposed to George’s Lasso prior). Without incorporating any specific modelling on potential change-point, fair enough given that the parameter is moving with time, unhindered. Her MCMC choices involved discrete parameters with Negative Binomial and Poisson parameters, allowing for partially integrated or collapsed solutions. Possibly further improved by Swendsen-Wang steps.

I then attended the (advanced) Langevin session after agonising upon my choice for a wealth of options! Sam Power presented a talk linking simulation with optimisation targets, over measure spaces. With Wasserstein gradient flow algorithms that resemble Langevin algorithms once discretised by a particle system. (A natural resolution producing a somewhat unnatural form of measure estimator since made of Dirac masses, from which very little can be learned.) Then [my Warwick colleague & coauthor] Any Wang on underdamped Langevin diffusions. when Poincaré‘s inequality fails, but convergence (in total variation) still occurs. Followed by Peter Whalley on splitting methods (where random hypergeometric subsampling dominates Robbins-Monro) and stochastic gradient algorithms, in a connected (to the previous talks) way since involving underdamped aspects. (With a personal discovery of Polyak’s heavy ball method.)

The afternoon session saw me facing a terrible dilemma with three close friends talking at the same time! Eventually opting for PDMPs, over simulation-based inference and recalibration for approximate Bayesian methods. Kengo Kamatani gave a general introduction to PDMPs, before explaining the automated implementation he considered with Charly Andral (during Charly’s visit to ISM, Tokyo, two summers ago). Towards accelerating the generation of the jump time. Then Luke Hardcastle applied PDMPs for survival prediction, using spike & slab priors and sticky PDMPs. And Jere Koskela (formerly Warwick) extended zig-zag sampling to discrete settings (incl. Kingman’s coalescent.)

The (rather long) day was not over yet since we had planned an extra on-site OWABI seminar & webinar with two participants in the conference, Filippo Pagani (Warwick and OCEAN postdoc) using fusion for federated learning, with a trapezoidal approximation, and Maurizio Filippone on GANs as hidden perfect ABC model selection, a GAN providing an automatic density estimator… With astounding Gemini-generated cartoons! Videos are soon to be available. A big congrats to the speakers who managed to convey their ideas and results despite the late hour! (On the extra-academic side, I was invited last night to a genuine Szechuan dinner in Chinatown, with a large array of spicy dishes if not that spicy!, and a rare opportunity to taste abalone. And bullfrogs. Quite a treat! And a good reason to skip dinner altogether!)

Bayesian inference: challenges, perspectives, and prospects

Posted in Books, Statistics, University life with tags , , , , , , , , , , , , , , , , , on March 29, 2023 by xi'an

Over the past year, Judith, Michael and I edited a special issue of Philosophical Transactions of the Royal Society on Bayesian inference: challenges, perspectives, and prospects, in celebration of the current President of the Royal Society, Adrian Smith, and his contributions to Bayesian analysis that have impacted the field up to this day. The issue is now out! The following is the beginning of our introduction of the series.

When contemplating his past achievements, it is striking to align the emergence of massive advances in these fields with some papers or books of his. For instance, Lindley’s & Smith’s ‘Bayes Estimates for the Linear Model’ (1971), a Read Paper at the Royal Statistical Society, is making the case for the Bayesian analysis of this most standard statistical model, as well as emphasizing the notion of exchangeability that is foundational in Bayesian statistics, and paving the way to the emergence of hierarchical Bayesian modelling. It thus makes a link between the early days of Bruno de Finetti, whose work Adrian Smith translated into English, and the current research in non-parametric and robust statistics. Bernardo’s & Smith’s masterpiece, Bayesian Theory (1994), sets statistical inference within decision- and information-theoretic frameworks in a most elegant and universal manner that could be deemed a Bourbaki volume for Bayesian statistics if this classification endeavour had reached further than pure mathematics. It also emphasizes the central role of hierarchical modelling in the construction of priors, as exemplified in Carlin’s et al.‘Hierarchical Bayesian analysis of change point problems’ (1992).

The series of papers published in 1990 by Alan Gelfand & Adrian Smith, esp. ‘Sampling-Based Approaches to Calculating Marginal Densities’ (1990), is overwhelmingly perceived as the birth date of modern Markov chain Monte Carlo (MCMC) methods, as itbrought to the whole statistics community (and the quickly wider communities) the realization that MCMC simulation was the sesame to unlock complex modelling issues. The consequences on the adoption of Bayesian modelling by non-specialists are enormous and long-lasting.Similarly, Gordon’set al.‘Novel approach to nonlinear/non-Gaussian Bayesian state estimation’ (1992) is considered as the birthplace of sequential Monte Carlo, aka particle filtering, with considerable consequences in tracking, robotics, econometrics and many other fields. Titterington’s, Smith’s & Makov’s reference book, ‘Statistical Analysis of Finite Mixtures’ (1984)  is a precursor in the formalization of heterogeneous data structures, paving the way for the incoming MCMC resolutions like Tanner & Wong (1987), Gelman & King (1990) and Diebolt & Robert (1990). Denison et al.’s book, ‘Bayesian methods for nonlinear classification and regression’ (2002) is another testimony to the influence of Adrian Smith on the field,stressing the emergence of robust and general classification and nonlinear regression methods to analyse complex data, prefiguring in a way the later emergence of machine-learning methods,with the additional Bayesian assessment of uncertainty. It is also bringing forward the capacity of operating Bayesian non-parametric modelling that is now broadly accepted, following a series of papers by Denison et al. in the late 1990s like CART and MARS.

We are quite grateful to the authors contributing to this volume, namely Joshua J. Bon, Adam Bretherton, Katie Buchhorn, Susanna Cramb, Christopher Drovandi, Conor Hassan, Adrianne L. Jenner, Helen J. Mayfield, James M. McGree, Kerrie Mengersen, Aiden Price, Robert Salomone, Edgar Santos-Fernandez, Julie Vercelloni and Xiaoyu Wang, Afonso S. Bandeira, Antoine Maillard, Richard Nickl and Sven Wang , Fan Li, Peng Ding and Fabrizia Mealli, Matthew Stephens, Peter D. Grünwald, Sumio Watanabe, Peter Müller, Noirrit K. Chandra and Abhra Sarkar, Kori Khan and Alicia Carriquiry, Arnaud Doucet, Eric Moulines and Achille Thin, Beatrice Franzolini, Andrea Cremaschi, Willem van den Boom and Maria De Iorio, Sandra Fortini and Sonia Petrone, Sylvia Frühwirth-Schnatter, Sara Wade, Chris C. Holmes and Stephen G. Walker, Lizhen Nie and Veronika Ročková. Some of the papers are open-access, if not all, hence enjoy them!

tipping statistics

Posted in Statistics with tags , , , on December 7, 2022 by xi'an