Archive for Philosophy of Science

when open publishing is not fair [PCI webinar, 20 March, 4pm CET]

Posted in Books, University life with tags , , , , , , , , , , , on March 15, 2025 by xi'an

9th seminar of the PCI webinar series

Mandatory registration using this link: https://univ-cotedazur.zoom.us/meeting/register/rz8ZKReZQeqs-3yR3S6q4g

When Open Publishing Is Not Fair

Sabina Leonelli (Technical University of Munich, TUM)

Summary: There are obvious ways in which Open Access has augmented inequity rather than mitigating it, for instance in relation to Author Publishing Costs and the differential access that researchers based in academic institutions around the world may have to publishing deals and packages. Less obvious but equally fundamental are inequities in the access to infrastructures, skills and information fostering an effective use of online resources ranging from Open Access journals to Open Data infrastructures. Most importantly, openness as a paradigm of “sharing” is predicated on a model of research practice that does not fit well with most domains and methods of research, and particularly with science done in low-resourced environments. I reflect on these issues and draw on examples and cases emerging from the PHIL_OS project (“A Philosophy of Open Science for Diverse Research Environments”; www.opensciencestudies.eu ), as well as my experiences as Open Science advocate and participant in Open Access debates over the last ten years.

Speaker’s bio: After high school in Italy, Sabina Leonelli studied History and Philosophy of Science at University College London (BSc Hons, 2000) and London School of Economics (MSc, 2001). She earned a PhD from Vrije Universiteit Amsterdam (2007), while research assistant for Hasok Chang and attending the Dutch graduate schools for STS and philosophy. After coming back to LSE to work with Mary Morgan (2006-2008), she moved to the Centre for the Study of the Life Sciences at the University of Exeter, which she directed from 2013 to 2024. She was appointed TUM Professor on 09/24. Building on philosophical, historical and social science methods and collaborations with scientists and policy-makers, Sabina Leonelli studies: (1) the role of technology, data and organisms in knowledge production, and especially how computing and digitalisation efforts are transforming research and its social dynamics and roles; and (2) the institutionalisation of Open Science as a window on the methods, epistemology and political economy of contemporary scientific inquiry, particularly in the life, biomedical and environmental sciences.

What is the PCI webinar series?
-What is it? Seminars on research practices, publication practices, evaluation, scientific integrity, meta-research.
-How does it work? Remote conferences using zoom with registration.
-For whom is it? For anyone interested in scholarly publication, all PCI users, all PCI recommenders who do preprint evaluations for PCI, authors of articles, etc.
-When is it? Once a quarter
-Why is it for? To learn about scholarly publishing, to improve our knowledge about scholarly review, to become better reviewers, to create a sense of community among PCI users.

Find details about the PCI webinar series and past seminars at https://peercommunityin.org/pci-webinar-series/

The Art of Uncertainty [not my book review]

Posted in Books, Statistics with tags , , , , , , , , on October 26, 2024 by xi'an

The Guardian published earlier this week a general public review of David Spiegelhalter’s most recent book, The Art of Uncertainty: How to Navigate Chance, Ignorance, Risk, and Luck, about to be published by W. W. Norton & Company (according to Amazon). A review written by John Naughton, staying rather general (with the main examples selected for the review being the birthday problem, and the typing monkey not doing great after 1300 days hitting one key per second at random) and constantly positive, which is not surprising given David’s talents at telling tales about our trade! (And with deeper comments by David Hand and Adrian Smith.)  Coïncidence or correlation? David also had a new entry in his philosophy column the very same week, about luck (in plane accidents and in the sequence of lucky events that led to his being born). The cover refers to double yolkers, a great example of apparent luck that David has used many times as not so random! (Warning: there are several books sharing the same title!)

Philosophies, Puzzles and Paradoxes [book review]

Posted in Books, pictures, Statistics, Travel, University life with tags , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , on May 25, 2024 by xi'an

Yudi Pawitan and Youngjo Lee have written a book that recently caught my attention within the CRC Press list of new publications. Because philosophy, puzzles, and paradoxes are definitely of interest to me (as shown by numerous entries in the ‘Og!). The subtitle of said book is A Statistician’s Search for Truth.

Reviews of the book are already available, with for instance Andrew Gelman stating that he disagrees “with much of this book, but it’s an entertaining and thought-provoking introduction to some challenging questions” or Stephen Senn starting the foreword with “This is a remarkable book: wide-ranging, ambitious, challenging and profound but also intriguing, fascinating and original.” (Senn is also cited within the book for his discussion of our revisit of Harold Jeffreys’ Theory of Probability.) Nice cover as well (albeit I could not trace the origin of it, inside or outside the book.)

The book is made of three parts, one on the philosophical approaches to truth, scientific discovery, deduction, and induction, a second one on probability theories, with philosophical motivations, Bayesian inference, and likelihood-based inference, and a third section on paradoxes. Given that both authors are senior authors who have contributed to likelihood inference throughout their career, incl. the books In All Likelihood and Generalized Linear Models with Random Effects, the likelihood approach is somewhat privileged against other statistical resolutions towards the resolution of the paradoxes, with a defence of confidence distributions and a chapter on epistemic confidence that mostly stems from recent papers by the authors, like Pawitan et al.  (2023) and Lee and Lee (2023). I find the discussion therein somewhat unclear, esp. because the same notation Pr(.) is employed for different probability notions.

“Epistemic confidence is the objective measure of uncertainty that’s attached to single events, where the objectivity is based on a consensus of rational minds.” (p.197)

The philosophy part is following the (European) Enlightenment in producing more and more involved discussions on reason, knowledge and scientific discovery. This exploration is an easy read, as it does not delve particularly deeply in the arguments of Kant, Hume, or Popper. With the apparently unescapable mention of Gödel’s incompleteness theorem, including a sausage citation from Poincaré that reminded of that strip from Tintin in America:which, most probably, he would have applied to Ais! Several sections about pseudo-rational attempts to demonstrate the existence of Dog could have been skipped as well.

The part of probability already considers paradoxes which, like the subsequent ones are mostly the consequence of using natural (and hence ambiguous) languages instead of mathematical descriptions—incl. the statement of the Likelihood Principle. It also discusses Keynes’ logical (or imprecise) probabilities, briefly if appropriately given the pessimistic views of young Keynes on the assessment of the probability of an event. Savage is privileged enough to enjoy an entire chapter discussing his 1950’s axioms leading to the existence of a (subjective)  prior on “the states of the world”. This is followed by a chapter on Inverse probability (aka Bayesian statistics), where the authors consider Bayes’ 1763 Essay to have stayed mostly unnoticed till  the beginning of the 20th Century, which sounds a somewhat subjective judgement. (And as uncovered by Steve Stiegler, the original title of the Essay was indeed intended as a reply to Hume.) A further if short chapter is dedicated to the search for the prior distribution. Which thus gives the misguided impression that there should exist such a thing, rather than acknowledging that Bayesian statements are relative to the prior measure. The remainder of the discussion on invariant and reference priors is however mostly standard. Except when falling for the marginalisation paradox when stating that a product of improper priors implies independence on p.144.

The paradoxes examined in the final part are Allais’ (an alumni of Lycée Lakanal!), and Ellsberg’s, avatars of the Saint Petersburg paradox and referring to failing to adhere to rational decision-making and not in the least to statistics. Conjunction and inclusion “fallacious fallacies”, which are central to Kahneman’s Thinking fast and slow bestseller, and attributed to reasoning in terms of likelihood rather than of probability (without accounting for multiple testing on p.228). A whole if short chapter on the Monty Hall and three prisoners paradoxes, another predictable occurrence in a book on reasoning paradoxes. Again mostly a matter of poor wording, plus relying on the choice of an underlying probability model, for which the authors again follow a likelihood approach, the number of the prize door or of the freed prisoner being the parameter. Kyburg’s (very weak) lottery paradox and related forensic paradoxes, concluding with the rejection of judgements based solely on probability reasoning. Hempel’s paradox of the ravens, a priori unrelated with statistical evidence, but turned into one by squeezing in some sampling models. Finishing with the (envelope) exchange paradox, where the authors refuse to put a prior on the unknown parameter but end up with a solution equivalent to adopting a Jeffreys prior.

In conclusion, this attempt at connecting statistical inference and philosophy, probability concepts and rational decision making, paradoxes and modelling, within a single book is academically sound and overall enjoyable, if not outstanding or remarkable as it does not constitute a radical move away from existing analyses of those classical paradoxes. Furthermore, I find the paradoxes overwhelmingly distant from genuine statistical settings and involving a rather stretched notion of data. Still, methinks I will keep this book in my bookcase, rather than leaving it for the taking in the department coffee room!

As I was completing the book and getting towards writing this book review, I also noticed a two page blurb in Significance (May 2024 issue) written by the authors on their book. (which happens rather frequently with this magazine). Unsurprisingly, the contents provd mostly extracted from the preface and introduction With a nice ravens picture (in conjunction with the raven paradox).

[Disclaimer about potential self-plagiarism: this post or an edited version may eventually appear in my Books Review section in CHANCE.]

maths as catchy background [and no further future for humanity]

Posted in Books, pictures, University life with tags , , , , , , , , , , , on May 11, 2024 by xi'an

BFF⁷ postponed

Posted in Books, pictures, Statistics, Travel, University life with tags , , , , , , , , on March 31, 2020 by xi'an