Archive for MaxEnt2009

MaxEnt2009

Posted in Statistics with tags , , , , on July 6, 2009 by xi'an

The revision of my talk for the MaxEnt2009 conference is now available on slideshare as

The major difference with the talks I gave in Montréal, Edinburgh, Warwick or Rimini is the additional experiment we ran with Darren Wraith on the banana targets already used in the “PMC for cosmologist” paper. As for the mixture benchmark used in the paper with Nicolas Chopin, we found that implementing nested sampling by the book, ie based on the lighthouse code provided in the original papers, led to the right value on average but with a lot more variability than for importance sampling solutions (with a comparable number of iterations).

When running this morning on the campus (i.e. wading through water particles without a snorkel), I thought—helped by comments from Olivier Cappé—that the best explanation for nested sampling is one of importance sampling, the weight of points being the prior mass of the current upper likelihood region. Obviously, this is not the whole story since those constrained priors have a smaller support than the posterior, but this may help in a better evaluation of nested sampling.

La partenza per MaxEnt 2009

Posted in Books, Statistics, Travel with tags , , , , on July 4, 2009 by xi'an

Just to let this indefinable perfume of Italy linger for a few more posts, but there is no objective reason to switch to Italian… I am actually off to Oxford, Mississippi, at the MaxEnt 2009 meeting, which is the 29th workshop on Bayesian Inference and Maximum Entropy Methods in Science and Engineering. Despite the strong connections with my research interests, I have never attended one of those conferences and this sounds exciting. Especially given my talk there on computational methods, which covers in particular nested sampling with the critical views summarised in this post. This promises for interesting exchanges, since the inventor of nested sampling, John Skilling, is one of the founding fathers of the maximum entropy community.

NS1

This will also give me the opportunity to go over the new revision of the paper before sending it back to Biometrika. The reviews were so lukewarm that I was ready to pack up and go. Fortunately, Nicolas Chopin overrode my depressive tendencies and launched into the revision! All I have to do in the coming days is thus to compile once again the seven pages of the Biometrika style manual to make sure we comply with every item of it. (The editorial requests of Biometrika go beyond most other journals’, even PNAS, which is a pain when writing a paper, because the time spent of complying with the stylistic restrictions will be wasted if the paper is rejected!, but which is also most enjoyable at the reader’s level.)

Oxford is the home town of William Faulkner and. as such, enjoys a literary atmosphere (whatever that means) with several genuine bookstores, including Square Books. Given that I have never been in the South (Florida being a separate geographical entity!), this is also an interesting opportunity. Even though I am not looking forward the hot, clammy, humid weather (humidity is currently 78% at 11pm…). And considering that MaxEnt 2003 was in Jackson Hole, Wyoming…